I think Bligh has had a rather unfair press. He was not a strict captain by the standards of the time, in fact probably the reverse - the mutiny was led by an officer who had been demoted for dereliction of duty (not flogged). "He scolded when other captains would have whipped, and whipped when other captains would have hanged."
However, his successful long voyage in an overcrowded open boat showed that he was a brilliant seaman, and a good leader.
As captain of the 56 gun HMS Glatton he was commended by Nelson for his actions in the Battle of Copenhagen, where he followed Nelson's lead in ignoring Admiral Parkker's signal to disengage, and repeated Nelson's signal to the rest of the fleet.
As Governor of NSW he was not popular with the ruling oligarchy, including the NSW Corps, because he tried, unsuccessfully, to limit their blatant corruption and enforce the law. He was never very diplomatic. He was succeeded by Macquarie, who was even more unpopular, but had a regiment of highlanders to support him, and actually got a lot done in spite of the remnants of the disbanded NSW Corps.
John

