G`day , i don`t think it`s been made clear to you .
If you use the serpy belt you`ll need Air con compressor and the Power steering pump and the Alternator and the Water pump and the Crank pulley and the Belt tensioner all to suit the Serpintine Belt ,of coarse the right lenght belt as well .
If you use the V belts , you`ll need to swap all your bits mentioned above AC ,PS , ALT , WP , tensioners etc with their brackets .
Which means changing the timing cover and at the same time working out which distributor you`ll use and its drive , oil pump .
The water pumps and fan viscos units are not interchangeable as in the 3.9 pump won`t physically fit on the 3.5 timing cover and visa versa .The 3.9 waterpump viscous mount is right hand thread and the 3.5 waterpump viscous mount is left hand thread . The Alt on the 3.9 is mounted in the middle and above unlike the 3.5 ...ETC.
Unless you get all the 3.9 bits for the front of the engine , i`d suggest that fitting all the V belt bits will be easier and cheaper because you already have it all .
The EFI stuff is pretty much the same as mentioned it`s really only the ECU its self that is different and will plug in the same as the 3.5 ECU
We have a 4.0ltr with V belts , it required the spacer Philip mentioned the 3.9 doesn`t as he also mentioned .
Cheers

