When I removed my compressor a couple of years back I had the same issue and had to cut the pipes a couple of inches from the compressor. As you indicated these pipes are the air intake from the air filter up in the drivers side rear quarter and the compressor exhaust pipe which goes to the same location. Both are low pressure so dont need any special piping.
I just used some rubber fuel line of the appropriate size as a joiner to connect the short bit of pipe coming out of the compressor to the pipes already running under the car - works fine.
REMLR 243
2007 Range Rover Sport TDV6
1977 FC 101
1976 Jaguar XJ12C
1973 Haflinger AP700
1971 Jaguar V12 E-Type Series 3 Roadster
1957 Series 1 88"
1957 Series 1 88" Station Wagon
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